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Are you importing via FileMaker Pro or is the server doing the import via Perform Script on Server? The former should continue to work just fine. I have not tested an XML import in a server-side script with FileMaker Cloud.
ESS is supported for MySQL, Microsoft SQL Server, and Oracle data sources. A few solutions we've migrated to FileMaker Cloud use Microsoft SQL Server via ESS. Those ESS data sources have continued to work fine on clients and server-side scripts. Once the ODBC data source was configured in FileMaker Cloud, no other changes were required.