There is definitely a selection layer issue with 16. Try using the "+" key. That is the documented shortcut to edit a script step options. Also try tabbing then hitting space.
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Thank you for your post!
I was able to reproduce this issue in MacOS 10.12 Sierra with FileMaker Pro 16.0.1 (Advanced). This does not seem to be an issue on the Windows Operating System. I will forward this information to testing and development for review.